Click on a chromosome for a closer view
Ensembl Mouse is based on the NCBI m36 mouse assembly (April 2006, strain C57BL/6J).
The Mouse Genome Sequencing Consortium is a joint project between
The Whitehead Institute/MIT Center for Genome Research,
The Washington University Genome Sequencing Center,
The Wellcome Trust Sanger Institute
and EMBL - EBI to provide the Mouse genome sequence to the world.
We work closely with other Mouse groups to provide an integrated resource (see below for credits).
This site provides a full Ensembl gene build for the above assembly. There are some major changes in the assembly; for more details see the NCBI build statistics .
Modifications to the systems have further improved the gene set. 96% of the known genes and 60% of the novel genes from build m35 retain the same Ensembl gene ids in this release.
| Assembly: | NCBI m36, Dec 2005 |
| Genebuild: | Ensembl, June 2006 |
| Database version: | 39.36 |
| Known genes: | 21,839 |
| Novel genes: | 2,599 |
| Pseudogenes: | 1,359 |
| RNA genes: | 2,170 |
| Genscan gene predictions: | 71,259 |
| Gene exons: | 231,010 |
| Gene transcripts: | 32,661 |
| Base Pairs: | 2,606,871,462 |
| Golden Path Length: | 2,567,242,967 |
| Most common InterPro domains: | Top 40 Top 500 |
© 2009 WTSI / EBI. Ensembl is available to download for public use - please see the code licence for details.
